STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49701.1Mechanosensitive ion channel family protein; COG0668 Small-conductance mechanosensitive channel. (289 aa)    
Predicted Functional Partners:
EAR49702.1
COG2154 Pterin-4a-carbinolamine dehydratase.
       0.807
EAR49703.1
COG3146 Uncharacterized protein conserved in bacteria.
       0.807
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.694
EAR49704.1
Phosphodiesterase-like; COG0584 Glycerophosphoryl diester phosphodiesterase.
       0.686
EAR49705.1
Hypothetical protein; COG0251 Putative translation initiation inhibitor, yjgF family.
       0.681
EAR49706.1
Type I secretion membrane fusion protein, HlyD family protein; COG0845 Membrane-fusion protein.
       0.527
EAR49707.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
       0.527
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
     
 0.479
EAR50153.1
Glutathione-regulated potassium-efflux system protein; COG0475 Kef-type K+ transport systems, membrane components; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.450
EAR51560.1
Two-component sensor histidine kinase; COG2203 FOG: GAF domain.
     
 0.440
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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