close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49708.1COG2853 Surface lipoprotein. (262 aa)    
Predicted Functional Partners:
EAR49709.1
Toluene tolerance family protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
 
 
 0.985
EAR51610.1
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
   
 0.839
EAR51592.1
ABC transporter, ATPase subunit; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
   
 0.808
EAR51593.1
Membrane protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
   
 0.803
EAR49710.1
Hypothetical protein.
       0.798
EAR49711.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.693
EAR49707.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
       0.646
EAR49706.1
Type I secretion membrane fusion protein, HlyD family protein; COG0845 Membrane-fusion protein.
 
     0.635
EAR49883.1
Hypothetical protein; COG1694 Predicted pyrophosphatase.
   
    0.605
EAR49704.1
Phosphodiesterase-like; COG0584 Glycerophosphoryl diester phosphodiesterase.
       0.537
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.