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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49715.1FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins. (974 aa)    
Predicted Functional Partners:
EAR49714.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
  
 0.908
ftsQ
Cell division protein ftsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
   
 
 0.907
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
   
 0.818
EAR53051.1
Chromosome partitioning protein parB; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
   
 0.798
EAR50412.1
Hypothetical protein; COG1372 Intein/homing endonuclease.
    
   0.772
EAR50584.1
Type I secretion target repeat protein; COG1866 Phosphoenolpyruvate carboxykinase (ATP).
    
   0.772
EAR49472.1
Hypothetical protein.
    
   0.772
EAR52493.1
Hypothetical protein.
    
   0.772
EAR49795.1
Hypothetical protein.
    
   0.772
EAR51224.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin.
    
   0.772
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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