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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49666.1Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. (309 aa)    
Predicted Functional Partners:
EAR49665.1
Putative esteraselipase/thioesterase protein; COG0400 Predicted esterase.
    0.995
EAR52633.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.858
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.764
EAR52419.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
    0.674
EAR52681.1
Rhodanese domain protein/cystathionine beta-lyase; COG0607 Rhodanese-related sulfurtransferase.
   
 
  0.668
nuoD
NADH dehydrogenase delta subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
    0.651
EAR49667.1
Thiol-specific antioxidant protein; COG0450 Peroxiredoxin.
  
 
 0.555
EAR51564.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
     
 0.521
EAR51428.1
Biphenyl-2,3-diol 1,2-dioxygenase III; COG2514 Predicted ring-cleavage extradiol dioxygenase.
 
  
  0.506
EAR50209.1
Possible flagellar switch protein FliM.
    
   0.489
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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