Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAR49618.1 | EAR49619.1 | OG2516_12551 | OG2516_12556 | COG3214 Uncharacterized protein conserved in bacteria. | D-amino acid dehydrogenase small subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.417 |
| EAR49618.1 | EAR50784.1 | OG2516_12551 | OG2516_09303 | COG3214 Uncharacterized protein conserved in bacteria. | Pyridoxamine 5'-phosphate oxidase family protein; COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase. | 0.423 |
| EAR49618.1 | folE2 | OG2516_12551 | OG2516_07440 | COG3214 Uncharacterized protein conserved in bacteria. | Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.400 |
| EAR49618.1 | smpB | OG2516_12551 | OG2516_12546 | COG3214 Uncharacterized protein conserved in bacteria. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.550 |
| EAR49619.1 | EAR49618.1 | OG2516_12556 | OG2516_12551 | D-amino acid dehydrogenase small subunit; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG3214 Uncharacterized protein conserved in bacteria. | 0.417 |
| EAR50784.1 | EAR49618.1 | OG2516_09303 | OG2516_12551 | Pyridoxamine 5'-phosphate oxidase family protein; COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase. | COG3214 Uncharacterized protein conserved in bacteria. | 0.423 |
| folE2 | EAR49618.1 | OG2516_07440 | OG2516_12551 | Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate. | COG3214 Uncharacterized protein conserved in bacteria. | 0.400 |
| smpB | EAR49618.1 | OG2516_12546 | OG2516_12551 | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | COG3214 Uncharacterized protein conserved in bacteria. | 0.550 |