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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50220.1Probable sorbitol-binding periplasmic protein; COG1653 ABC-type sugar transport system, periplasmic component. (146 aa)    
Predicted Functional Partners:
EAR51327.1
ABC sorbitol/mannitol transporter, periplasmic binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.976
EAR50222.1
Probable sorbitol/mannitol transport inner membrane protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.942
EAR50221.1
ABC sorbitol/mannitol transporter, inner membrane subunit; COG1175 ABC-type sugar transport systems, permease components.
  0.940
EAR50223.1
ABC sorbitol/mannitol transporter, ATPase subunit; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  0.857
EAR50224.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
     0.807
EAR51910.1
COG0395 ABC-type sugar transport system, permease component.
  
  0.715
EAR49526.1
Hypothetical protein; COG3409 Putative peptidoglycan-binding domain-containing protein.
       0.631
EAR52550.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
   
  0.579
EAR52256.1
ABC alpha-glucoside transporter, inner membrane subunit AglG; COG0395 ABC-type sugar transport system, permease component.
   
  0.552
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
   
  0.552
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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