close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50225.1COG0383 Alpha-mannosidase. (796 aa)    
Predicted Functional Partners:
EAR50226.1
Hypothetical protein; COG1802 Transcriptional regulators.
       0.727
EAR51843.1
Hypothetical protein.
 
     0.715
EAR50227.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
       0.707
EAR51837.1
Hypothetical protein; COG1874 Beta-galactosidase.
  
     0.698
EAR51147.1
Hypothetical protein; COG1874 Beta-galactosidase.
  
     0.684
EAR51596.1
Two-component system regulatory protein; COG0784 FOG: CheY-like receiver.
   
    0.642
EAR52516.1
Chemotaxis response regulator; COG0784 FOG: CheY-like receiver.
   
    0.642
EAR52972.1
Hypothetical protein; COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.
 
   
 0.617
EAR51906.1
Hypothetical protein; COG4354 Predicted bile acid beta-glucosidase.
  
     0.617
EAR51787.1
Hypothetical protein; COG3408 Glycogen debranching enzyme.
  
    0.591
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.