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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50226.1Hypothetical protein; COG1802 Transcriptional regulators. (224 aa)    
Predicted Functional Partners:
EAR50227.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
     0.805
EAR51940.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.774
EAR51831.1
COG1802 Transcriptional regulators.
  
     0.774
EAR52117.1
Putative transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.774
EAR52674.1
Transcriptional regulatory protein; COG1802 Transcriptional regulators.
  
     0.773
EAR49999.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.773
EAR53154.1
COG1802 Transcriptional regulators.
  
     0.773
EAR52553.1
COG1802 Transcriptional regulators.
  
     0.768
EAR51799.1
COG1802 Transcriptional regulators.
  
     0.767
EAR51864.1
COG2186 Transcriptional regulators.
  
    0.755
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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