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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50233.1Putative spermidine/putrescine transport atp-binding abc transporter protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (348 aa)    
Predicted Functional Partners:
EAR50234.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.981
EAR50235.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.978
EAR50232.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 
  0.930
EAR51709.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.909
EAR52147.1
ABC peptide transporter, fused ATPase domains; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component.
 
     
0.896
EAR50962.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.885
EAR51708.1
Hypothetical protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
  0.864
EAR50961.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.857
EAR50320.1
ABC polyamine/opine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.813
modB
Molybdate transport permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  0.805
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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