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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49532.1Phospholipase D/Transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes. (480 aa)    
Predicted Functional Partners:
EAR49387.1
Endonuclease/exonuclease/phosphatase family protein; COG3568 Metal-dependent hydrolase.
 
  0.848
EAR49780.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
   
   0.825
EAR51722.1
Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.746
EAR52165.1
Phosphatidate cytidylyltransferase; COG0575 CDP-diglyceride synthetase; Belongs to the CDS family.
     
 0.733
EAR50785.1
Acyltransferase family protein; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.705
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 
 0.663
EAR52308.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; Belongs to the UbiA prenyltransferase family.
    
  0.640
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.600
EAR49533.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
       0.543
EAR49534.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.543
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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