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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51923.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (360 aa)    
Predicted Functional Partners:
EAR52231.1
Sodium/calcium exchanger membrane region protein; COG0530 Ca2+/Na+ antiporter.
  
     0.654
EAR51113.1
Sodium/calcium exchanger membrane region protein; COG0530 Ca2+/Na+ antiporter.
  
     0.651
EAR51924.1
COG1957 Inosine-uridine nucleoside N-ribohydrolase.
       0.538
EAR51531.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.528
EAR51530.1
IS 426 transposase; COG2963 Transposase and inactivated derivatives.
  
     0.501
EAR51920.1
Transcriptional regulator, ArsR family protein; COG0640 Predicted transcriptional regulators.
       0.480
EAR51921.1
COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
       0.480
EAR51922.1
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
       0.480
cls
Cardiolipin synthetase.
  
     0.411
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
      
 0.408
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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