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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51926.1Amidase-related protein; COG2421 Predicted acetamidase/formamidase. (322 aa)    
Predicted Functional Partners:
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.784
EAR50236.1
COG0388 Predicted amidohydrolase.
    
 0.773
EAR51925.1
dTDP-glucose 4,6-dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
       0.773
EAR50021.1
COG1285 Uncharacterized membrane protein.
   
    0.728
EAR51163.1
COG0174 Glutamine synthetase.
  
  
  0.591
EAR51927.1
COG2188 Transcriptional regulators.
       0.525
EAR51928.1
Carbohydrate/pyrimidine kinase, PfkB family protein; COG0524 Sugar kinases, ribokinase family.
       0.525
EAR51929.1
COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains.
       0.465
EAR51930.1
Hypothetical protein; COG0434 Predicted TIM-barrel enzyme.
       0.465
EAR52084.1
Putative Glutathione-dependent formaldehyde dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
  
  0.443
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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