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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51959.1Rhamnosidase A. (780 aa)    
Predicted Functional Partners:
EAR51958.1
Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.927
EAR51956.1
COG0395 ABC-type sugar transport system, permease component.
 
     0.847
EAR51870.1
COG3250 Beta-galactosidase/beta-glucuronidase.
 
  0.816
EAR51957.1
COG1175 ABC-type sugar transport systems, permease components.
 
     0.799
EAR50488.1
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
     0.762
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.758
EAR52874.1
COG3533 Uncharacterized protein conserved in bacteria.
  
     0.750
EAR51906.1
Hypothetical protein; COG4354 Predicted bile acid beta-glucosidase.
  
  
  0.704
EAR51843.1
Hypothetical protein.
  
     0.696
EAR50589.1
Putative beta-mannosidase protein; COG3250 Beta-galactosidase/beta-glucuronidase.
 
  0.672
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.