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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52023.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EAR52024.1
COG3514 Uncharacterized protein conserved in bacteria.
       0.773
EAR49379.1
Possible DNA-binding protein.
  
     0.682
EAR51038.1
Possible DNA-binding protein; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
  
     0.669
EAR50504.1
COG3546 Mn-containing catalase.
  
     0.608
EAR52779.1
Hypothetical protein.
  
     0.590
EAR51830.1
Hypothetical protein.
  
     0.550
EAR50513.1
Aspartate-semialdehyde dehydrogenase; COG3668 Plasmid stabilization system protein.
  
     0.519
EAR50094.1
Na+/H+ antiporter, CPA1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
  
     0.517
EAR52025.1
Hypothetical protein.
       0.516
EAR50270.1
COG2120 Uncharacterized proteins, LmbE homologs.
  
     0.450
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.