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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50891.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
EAR51430.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
     0.773
EAR50367.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.772
EAR51629.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.767
EAR49604.1
Hypothetical protein.
  
     0.767
EAR50373.1
Hypothetical protein.
  
     0.762
EAR52009.1
Hypothetical protein.
  
     0.758
EAR50360.1
Hypothetical protein.
  
     0.756
EAR51575.1
Hypothetical protein.
  
     0.745
EAR52266.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.744
EAR51395.1
RNA pseudouridine synthase family protein; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
   
    0.742
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.