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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50899.1OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (176 aa)    
Predicted Functional Partners:
EAR50898.1
Lipoprotein, putative.
 
    
0.825
EAR49482.1
Hypothetical protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
 
  0.749
EAR50148.1
COG3409 Putative peptidoglycan-binding domain-containing protein.
  
    0.704
tolB
Translocation protein TolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  0.699
EAR52170.1
COG2825 Outer membrane protein.
 
 
 0.682
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.659
EAR52779.1
Hypothetical protein.
  
  0.648
EAR53009.1
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
  
 
  0.647
EAR52314.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.624
EAR49794.1
Hypothetical protein.
  
     0.605
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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