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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50901.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
EAR50902.1
Hypothetical protein.
 
     0.883
EAR50633.1
Hypothetical protein.
  
     0.775
EAR50158.1
Hypothetical protein.
  
     0.775
EAR49919.1
Hypothetical protein.
  
     0.775
EAR49920.1
epsK domain protein.
  
     0.775
EAR50634.1
Hypothetical protein.
  
     0.774
EAR50898.1
Lipoprotein, putative.
 
     0.774
EAR50534.1
Hypothetical protein.
  
     0.773
EAR52462.1
Hypothetical protein.
  
     0.767
EAR52994.1
core-2/I-branching enzyme family protein.
  
     0.763
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.