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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50913.1COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. (158 aa)    
Predicted Functional Partners:
EAR50912.1
Thioesterase family protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
  
 0.996
EAR50914.1
DNA-damage-inducible protein F; COG0534 Na+-driven multidrug efflux pump.
       0.711
EAR50910.1
Transcriptional regulator, MerR family protein; COG0789 Predicted transcriptional regulators.
  
    0.619
EAR50903.1
Fatty oxidation complex, alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.605
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.566
plsX
Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.550
EAR50911.1
Hypothetical protein.
       0.540
EAR51484.1
Nitroreductase family protein; COG0778 Nitroreductase.
  
    0.509
EAR49604.1
Hypothetical protein.
  
     0.504
EAR51357.1
Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.471
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.