close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50915.1COG3210 Large exoproteins involved in heme utilization or adhesion. (4660 aa)    
Predicted Functional Partners:
EAR52921.1
Lipolytic enzyme, G-D-S-L; COG2755 Lysophospholipase L1 and related esterases.
   
 0.874
EAR49576.1
Lipolytic enzyme, G-D-S-L family protein; COG2755 Lysophospholipase L1 and related esterases.
   
 0.874
EAR49446.1
PaxA, putative; COG2931 RTX toxins and related Ca2+-binding proteins.
  
 
 0.800
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.789
EAR52548.1
Hypothetical protein.
  
 0.774
EAR50916.1
Hypothetical protein.
 
     0.628
EAR50884.1
Putative membrane protein; COG2340 Uncharacterized protein with SCP/PR1 domains.
   
    0.582
EAR50885.1
Putative membrane protein; COG2340 Uncharacterized protein with SCP/PR1 domains.
   
    0.582
EAR53072.1
Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains.
   
    0.582
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
     
 0.566
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.