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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50930.1ATP-binding protein of sugar ABC transporter; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (346 aa)    
Predicted Functional Partners:
EAR52147.1
ABC peptide transporter, fused ATPase domains; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component.
 
     
0.857
EAR50263.1
Maltose transport inner membrane protein; COG3833 ABC-type maltose transport systems, permease component.
 
  0.826
malE
Periplasmic maltose-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
  
  0.794
EAR51288.1
ABC transporter, permease protein, MalFG family protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.741
EAR51313.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.713
EAR51910.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.711
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
  0.695
EAR51312.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
  
  0.694
EAR49656.1
COG0395 ABC-type sugar transport system, permease component.
  
  0.688
EAR50935.1
COG0765 ABC-type amino acid transport system, permease component.
   
  0.686
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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