STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50935.1COG0765 ABC-type amino acid transport system, permease component. (264 aa)    
Predicted Functional Partners:
EAR50934.1
Putative amino acid-binding periplasmic (signal peptide) abc transporter protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  0.999
EAR50217.1
ABC basic amino acid transporter, ATPase subunit; COG4598 ABC-type histidine transport system, ATPase component.
 0.998
EAR50023.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.998
EAR51791.1
Putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  0.993
EAR50219.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
  0.935
EAR50025.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; COG0765 ABC-type amino acid transport system, permease component.
 
 
 
0.926
EAR50027.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  0.911
lolD
ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
   
  0.806
EAR50026.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB; COG4597 ABC-type amino acid transport system, permease component.
 
 
0.782
EAR50936.1
Peptidyl-dipeptidase, putative; COG0339 Zn-dependent oligopeptidases.
      0.779
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.