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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49566.1COG4991 Uncharacterized protein with a bacterial SH3 domain homologue. (229 aa)    
Predicted Functional Partners:
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.851
EAR52636.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.588
EAR52762.1
Hypothetical protein; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
  
     0.535
EAR52042.1
Hypothetical protein.
  
  
  0.473
EAR49567.1
Trp repressor binding protein WrbA, putative; COG0655 Multimeric flavodoxin WrbA.
       0.466
EAR52825.1
COG2261 Predicted membrane protein.
  
     0.443
EAR49563.1
Glycosyl hydrolase, family 25; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
     0.435
EAR52824.1
COG2261 Predicted membrane protein.
  
     0.405
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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