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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49901.1Probable oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase. (270 aa)    
Predicted Functional Partners:
EAR50162.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
 0.799
EAR50659.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
   
 0.787
EAR52507.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.756
EAR52142.1
Probable transmembrane protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
 0.755
EAR52640.1
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
  0.736
EAR50694.1
Oxidoreductase, aldo/keto reductase family protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
  0.679
glpK
Probable glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.663
EAR49565.1
Oxidoreductase, aldo/keto reductase family protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 
0.638
EAR50587.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
 
  0.618
EAR50852.1
COG2032 Cu/Zn superoxide dismutase.
   
 
 0.612
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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