close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51223.1COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (271 aa)    
Predicted Functional Partners:
EAR51226.1
GAF domain protein; COG3605 Signal transduction protein containing GAF and PtsI domains.
 
  
  0.891
EAR51227.1
Peptidase, M50 family protein; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
  
  0.890
EAR52491.1
Probable ATP-binding/permease fusion ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
 0.831
EAR50169.1
COG1538 Outer membrane protein.
 
  0.796
EAR52070.1
GAF domain protein; COG0845 Membrane-fusion protein.
 
  
  0.795
EAR52069.1
Peptidase, M50 family protein; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
  
  0.793
EAR52925.1
Putative ABC transporter, fused inner membrane subunits; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.783
EAR52492.1
Hypothetical protein.
  
  0.750
EAR53089.1
Outer membrane efflux protein, putative; COG1538 Outer membrane protein.
  
  0.750
EAR51224.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin.
 
    0.684
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.