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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51229.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
EAR51230.1
Hypothetical protein.
 
     0.726
EAR52902.1
Hypothetical protein.
  
     0.703
EAR53165.1
Hypothetical protein.
  
     0.687
EAR49958.1
COG4932 Predicted outer membrane protein.
  
     0.613
EAR53010.1
Translocase.
  
     0.587
EAR50711.1
Hypothetical protein.
  
     0.559
EAR49468.1
Hypothetical protein.
  
     0.553
cutC
Hypothetical protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.507
EAR51232.1
Excinuclease ABC subunit B.
       0.507
EAR50362.1
Hypothetical protein.
  
     0.505
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.