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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCHypothetical protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (261 aa)    
Predicted Functional Partners:
EAR51232.1
Excinuclease ABC subunit B.
       0.773
EAR51361.1
Putative glycosyl hydrolase, beta-N-acetylhexosaminidase protein-like; COG3525 N-acetyl-beta-hexosaminidase.
 
     0.772
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.759
EAR51370.1
Putative ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
     0.744
EAR51369.1
Putative tagatose-6-phosphate aldose/ketose isomerase; COG2222 Predicted phosphosugar isomerases.
 
     0.682
EAR52056.1
COG2706 3-carboxymuconate cyclase.
 
    0.647
EAR51233.1
Hypothetical protein.
       0.605
EAR52717.1
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
     0.604
EAR51230.1
Hypothetical protein.
       0.572
nanE
Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
     0.565
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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