STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51238.1Lipoprotein, putative. (189 aa)    
Predicted Functional Partners:
EAR51239.1
Paraquat-inducible protein, putative; COG3008 Paraquat-inducible protein B.
   
 0.980
EAR51241.1
COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.971
EAR51240.1
COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.970
EAR50281.1
COG2911 Uncharacterized protein conserved in bacteria.
 
     0.537
EAR53064.1
NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.518
EAR51242.1
COG1396 Predicted transcriptional regulators.
       0.505
EAR52424.1
Hypothetical protein.
  
     0.485
EAR51304.1
TctB protein.
  
     0.457
EAR51441.1
Hypothetical protein.
  
     0.402
EAR49522.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.