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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50268.1Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis. (326 aa)    
Predicted Functional Partners:
EAR50271.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.954
EAR50270.1
COG2120 Uncharacterized proteins, LmbE homologs.
 
     0.953
EAR50269.1
Methyltransferase, putative; COG0500 SAM-dependent methyltransferases.
 
    0.947
EAR50272.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
    0.870
EAR50273.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
  0.825
EAR50274.1
Putative beta-(1-3)-glucosyl transferase; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
    
  0.741
EAR50277.1
Mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.610
EAR50267.1
Putative L-sorbosone dehydrogenase; COG2133 Glucose/sorbosone dehydrogenases.
       0.590
EAR49452.1
Nucleotide sugar epimerase/dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.534
EAR50275.1
Transcriptional regulator, Fnr-type; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
       0.486
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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