close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50274.1Putative beta-(1-3)-glucosyl transferase; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. (461 aa)    
Predicted Functional Partners:
EAR52998.1
COG1210 UDP-glucose pyrophosphorylase.
  
 
 0.872
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.846
EAR52506.1
COG0380 Trehalose-6-phosphate synthase.
   
 
  0.834
EAR52455.1
Diguanylate cyclase, putative; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 
 0.790
EAR51247.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.784
EAR53008.1
COG2003 DNA repair proteins; Belongs to the UPF0758 family.
  
    0.776
EAR50270.1
COG2120 Uncharacterized proteins, LmbE homologs.
 
     0.771
EAR50271.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.766
EAR50269.1
Methyltransferase, putative; COG0500 SAM-dependent methyltransferases.
 
     0.764
EAR50268.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
  0.741
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.