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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51162.1Transcriptional regulator, RpiR family protein; COG1737 Transcriptional regulators. (261 aa)    
Predicted Functional Partners:
EAR51163.1
COG0174 Glutamine synthetase.
 
    0.879
EAR51165.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
     0.797
EAR51164.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
       0.773
EAR51161.1
COG3931 Predicted N-formylglutamate amidohydrolase.
 
  
 0.762
EAR51160.1
Isochorismatase family protein; COG1335 Amidases related to nicotinamidase.
 
    0.741
EAR51168.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.705
EAR51167.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
     0.615
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.569
EAR51169.1
Acetamidase/formamidase family protein; COG2421 Predicted acetamidase/formamidase.
       0.568
EAR50866.1
KDPG/KHG bifunctional aldolase; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
    
 0.567
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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