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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51203.1COG3255 Putative sterol carrier protein. (92 aa)    
Predicted Functional Partners:
EAR51202.1
Putative Esterase/lipase/thioesterase; COG2267 Lysophospholipase.
       0.855
EAR51201.1
Hypothetical protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
       0.711
EAR51200.1
DNA ligase; COG1793 ATP-dependent DNA ligase.
       0.708
EAR51206.1
S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).
       0.679
EAR51204.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.654
EAR51207.1
Iron-sulfur cluster-binding protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.578
EAR51205.1
Helicase, putative; COG0513 Superfamily II DNA and RNA helicases.
       0.569
EAR49604.1
Hypothetical protein.
  
     0.547
EAR51789.1
Hypothetical protein; COG0160 4-aminobutyrate aminotransferase and related aminotransferases.
     
 0.419
EAR50903.1
Fatty oxidation complex, alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
     0.409
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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