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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49429.1Hypothetical protein; COG0611 Thiamine monophosphate kinase. (94 aa)    
Predicted Functional Partners:
EAR49430.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; COG0546 Predicted phosphatases.
       0.855
EAR49428.1
Two component diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.715
EAR52266.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.463
EAR49838.1
Hypothetical protein.
  
     0.440
EAR52826.1
Hypothetical protein.
  
     0.429
EAR52009.1
Hypothetical protein.
  
     0.419
EAR50544.1
Hypothetical protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division.
  
     0.410
EAR51328.1
COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family.
       0.406
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.