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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51328.1COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. (521 aa)    
Predicted Functional Partners:
EAR50661.1
Corrinoid methyltransferase protein, putative; COG5012 Predicted cobalamin binding protein.
  
  0.815
EAR52280.1
Hypothetical protein.
 
     0.791
EAR49560.1
COG3894 Uncharacterized metal-binding protein.
 
     0.791
EAR50662.1
Hypothetical protein.
 
     0.777
EAR50569.1
Aminomethyl transferase family protein; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
     0.768
EAR50997.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
  
  
  0.766
EAR51355.1
COG3239 Fatty acid desaturase.
  
     0.764
EAR50996.1
Oligopeptide/dipeptide ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
     0.751
EAR50995.1
Oligopeptide/dipeptide ABC transporter, permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
     0.744
EAR52277.1
Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain.
 
     0.722
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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