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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51343.1COG3264 Small-conductance mechanosensitive channel. (808 aa)    
Predicted Functional Partners:
EAR51344.1
Hypothetical protein; COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain.
       0.808
EAR51342.1
COG0031 Cysteine synthase.
       0.798
EAR49475.1
Membrane protein, MarC family protein; COG2095 Multiple antibiotic transporter.
  
    0.754
EAR51340.1
Tellurite resistance protein; COG0004 Ammonia permease.
       0.647
EAR51341.1
Tellurite resistance protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.603
EAR51345.1
Probable protease precursor.
       0.559
EAR51339.1
Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
       0.524
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
     
 0.481
EAR52170.1
COG2825 Outer membrane protein.
  
     0.467
EAR53023.1
Putative Helicase/Exonuclease; COG3893 Inactivated superfamily I helicase.
  
     0.467
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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