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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51353.1DNA binding protein, putative; COG1396 Predicted transcriptional regulators. (285 aa)    
Predicted Functional Partners:
EAR51354.1
COG3205 Predicted membrane protein.
 
     0.917
EAR51355.1
COG3239 Fatty acid desaturase.
 
     0.909
EAR50216.1
Hypothetical protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
     0.777
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.638
EAR51356.1
Membrane protein, putative; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.573
EAR51352.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.561
EAR51351.1
COG0695 Glutaredoxin and related proteins.
  
    0.551
EAR51350.1
Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.550
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
   
 0.535
EAR50569.1
Aminomethyl transferase family protein; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
     0.525
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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