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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51411.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
EAR51412.1
COG0346 Lactoylglutathione lyase and related lyases.
  
    0.809
EAR51410.1
Lipoprotein, putative.
 
    
0.800
EAR51413.1
Hypothetical protein.
 
     0.659
thyX
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
 
     0.572
EAR51414.1
Hypothetical protein.
       0.558
EAR51409.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
       0.490
EAR50397.1
Usg, putative.
  
     0.482
EAR53009.1
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
  
    0.435
EAR51394.1
COG3242 Uncharacterized protein conserved in bacteria.
  
     0.425
EAR49682.1
COG0303 Molybdopterin biosynthesis enzyme.
  
    0.414
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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