STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50150.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
EAR50149.1
Iron-sulfur cluster-binding protein; COG0633 Ferredoxin.
       0.855
EAR50148.1
COG3409 Putative peptidoglycan-binding domain-containing protein.
 
     0.765
EAR52478.1
Hypothetical protein.
  
     0.674
EAR52468.1
COG0038 Chloride channel protein EriC.
  
     0.526
EAR50371.1
Hypothetical protein.
  
     0.497
EAR50360.1
Hypothetical protein.
  
     0.488
EAR50691.1
Hypothetical protein.
  
     0.480
EAR53113.1
Hypothetical protein.
  
     0.455
EAR49678.1
Possible Endonuclease/Exonuclease/phosphatase fa.
  
     0.452
EAR52245.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.449
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.