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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50161.1Probable beta-galactosidase protein; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (746 aa)    
Predicted Functional Partners:
EAR49888.1
Putative aldose 1-epimerase protein; COG2017 Galactose mutarotase and related enzymes.
 
 0.888
EAR50508.1
COG1904 Glucuronate isomerase.
  
 
 0.877
EAR49569.1
Carbohydrate kinase, PfkB; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
  
    0.847
EAR52441.1
Putative d-galactose 1-dehydrogenase protein; COG0673 Predicted dehydrogenases and related proteins.
    
  0.845
EAR50162.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
  
  0.825
EAR51139.1
COG3119 Arylsulfatase A and related enzymes.
 
  0.593
EAR49728.1
COG0346 Lactoylglutathione lyase and related lyases.
  
     0.587
EAR51146.1
Putative choline-sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
  0.584
EAR50160.1
Regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins.
    
  0.571
EAR50488.1
COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.560
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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