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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50172.1Putative ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component. (507 aa)    
Predicted Functional Partners:
EAR50173.1
ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; COG1879 ABC-type sugar transport system, periplasmic component.
  0.994
EAR50171.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.961
EAR52569.1
ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.941
EAR50604.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.913
EAR52527.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.910
EAR51824.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
  0.907
EAR52526.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.906
EAR51806.1
Ribose ABC transporter, permease protein; COG4158 Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.905
EAR50605.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.895
EAR51945.1
Putative sugar uptake ABC transporter permease protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.889
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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