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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51825.1Sugar ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family. (853 aa)    
Predicted Functional Partners:
EAR51826.1
Hypothetical protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.977
EAR51805.1
Ribose ABC transporter, periplasmic binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
 0.974
EAR50173.1
ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; COG1879 ABC-type sugar transport system, periplasmic component.
 0.971
EAR53032.1
Putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.966
EAR52529.1
Ribose binding protein of ABC transporter; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.964
EAR52568.1
ABC sugar transporter, periplasmic ligand binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
 0.961
EAR50602.1
Putative periplasmic binding abc transporter protein; COG1879 ABC-type sugar transport system, periplasmic component.
  
 0.938
EAR51944.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; COG1879 ABC-type sugar transport system, periplasmic component.
  
 0.938
EAR51102.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
 0.938
EAR51824.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
0.930
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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