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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51843.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
EAR51842.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.821
EAR51841.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.814
EAR51906.1
Hypothetical protein; COG4354 Predicted bile acid beta-glucosidase.
 
     0.803
EAR51839.1
Oligopeptide ABC transporter, ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component.
       0.773
EAR51840.1
Oligopeptide ABC transporter, ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.773
EAR50225.1
COG0383 Alpha-mannosidase.
 
     0.715
EAR51838.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.711
EAR51959.1
Rhamnosidase A.
  
     0.696
EAR51837.1
Hypothetical protein; COG1874 Beta-galactosidase.
 
     0.664
EAR51870.1
COG3250 Beta-galactosidase/beta-glucuronidase.
 
     0.655
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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