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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51844.1Transcriptional regulator, IclR family protein; COG1414 Transcriptional regulator. (264 aa)    
Predicted Functional Partners:
EAR51714.1
COG2049 Allophanate hydrolase subunit 1.
  
    0.794
EAR51713.1
Urea amidolyase-related protein; COG1984 Allophanate hydrolase subunit 2.
  
    0.769
EAR52737.1
COG1414 Transcriptional regulator.
  
     0.703
EAR52652.1
COG1414 Transcriptional regulator.
  
     0.554
EAR52571.1
Amidohydrolase family superfamily protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
    0.554
EAR51851.1
Hypothetical protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
    0.498
EAR51717.1
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.436
EAR51864.1
COG2186 Transcriptional regulators.
  
  
 0.409
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.