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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51860.1Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (387 aa)    
Predicted Functional Partners:
EAR51858.1
Paral putative galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 
0.875
EAR51862.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
  
  0.872
EAR51856.1
COG1175 ABC-type sugar transport systems, permease components.
 
     0.804
EAR51857.1
COG0395 ABC-type sugar transport system, permease component.
 
     0.791
EAR51863.1
Fumarylacetoacetate (FAA) hydrolase family protein; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
    0.784
EAR51861.1
Hypothetical protein.
       0.775
EAR51859.1
ABC transporter, ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
       0.773
EAR51855.1
COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.703
EAR51851.1
Hypothetical protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
  0.539
EAR50243.1
Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
 
  
 
0.509
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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