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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51866.12-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonatedehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily. (390 aa)    
Predicted Functional Partners:
EAR49891.1
Putative 2-dehydro-3-deoxygalactonokinase; COG3734 2-keto-3-deoxy-galactonokinase.
 
 0.916
EAR51864.1
COG2186 Transcriptional regulators.
      0.886
EAR51865.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
    
  0.783
EAR51867.1
COG1175 ABC-type sugar transport systems, permease components.
       0.527
EAR51868.1
COG0395 ABC-type sugar transport system, permease component.
       0.527
EAR49890.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
   
 0.505
EAR51869.1
COG1653 ABC-type sugar transport system, periplasmic component.
       0.480
EAR52665.1
2-dehydropantoate 2-reductase; COG1893 Ketopantoate reductase.
   
    0.467
EAR51858.1
Paral putative galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.447
EAR50243.1
Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
  
  
 
0.409
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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