STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51908.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
EAR51907.1
Short-chain dehydrogenase/reductase SDR.
       0.773
EAR51909.1
Sugar ABC transporter, ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
       0.773
EAR51910.1
COG0395 ABC-type sugar transport system, permease component.
       0.773
EAR51911.1
COG1175 ABC-type sugar transport systems, permease components.
       0.773
EAR51912.1
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component.
       0.709
EAR51913.1
Sugar ABC transporter, ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
       0.637
EAR51914.1
Hypothetical protein.
       0.637
EAR51915.1
Hypothetical protein; COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase.
       0.629
EAR51916.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.629
EAR51906.1
Hypothetical protein; COG4354 Predicted bile acid beta-glucosidase.
       0.408
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.