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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50372.1Hypothetical protein. (47 aa)    
Predicted Functional Partners:
EAR50373.1
Hypothetical protein.
 
     0.894
EAR50154.1
Hypothetical protein.
  
     0.652
EAR50371.1
Hypothetical protein.
       0.642
EAR50370.1
Metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.612
EAR51590.1
Hypothetical protein.
  
     0.565
EAR50486.1
Membrane protein, putative; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
     0.485
EAR50369.1
COG1960 Acyl-CoA dehydrogenases.
       0.470
EAR50368.1
Sua5/YciO/YrdC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.436
EAR50380.1
MobC protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.425
EAR51579.1
DNA-binding protein HU, putative.
  
     0.421
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.