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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49911.1COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis. (266 aa)    
Predicted Functional Partners:
EAR49912.1
Hypothetical protein; COG1678 Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
       0.703
EAR50789.1
Hypothetical protein.
  
     0.542
EAR53120.1
HemY domain protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.516
EAR49965.1
Hypothetical protein; COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase.
  
     0.495
EAR51629.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.489
EAR49754.1
SlyX protein, putative.
  
     0.454
EAR50879.1
COG3176 Putative hemolysin.
  
     0.453
EAR50544.1
Hypothetical protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division.
  
     0.448
EAR52295.1
Putative cytochrome c-type biogenesis protein, cycH; COG4235 Cytochrome c biogenesis factor.
  
     0.446
EAR52337.1
Possible TolA protein.
 
     0.435
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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