Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR49927.1Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase. (460 aa)    
Predicted Functional Partners:
EAR49928.1
Putative glycolate oxidase subunit protein; COG0277 FAD/FMN-containing dehydrogenases.
 
 0.994
EAR49929.1
Putative glycolate oxidase subunit protein; COG0277 FAD/FMN-containing dehydrogenases.
 
 0.988
EAR52633.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.880
EAR51176.1
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
    
 0.878
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.877
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.868
EAR49525.1
Serine--glyoxylate transaminase, putative; COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
 
  
 0.860
EAR52681.1
Rhodanese domain protein/cystathionine beta-lyase; COG0607 Rhodanese-related sulfurtransferase.
    
 0.845
EAR53058.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
 
  
 0.845
EAR52469.1
Putative D-lactate dehydrogenase (cytochrome), FAD/FMN-containing oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
 
 0.844
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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