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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51420.1Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain). (290 aa)    
Predicted Functional Partners:
EAR51421.1
ATPase, MoxR family protein; COG0714 MoxR-like ATPases.
  
 0.989
EAR51419.1
Hypothetical protein.
 
    0.966
EAR51418.1
Hypothetical protein.
 
     0.937
EAR51422.1
COG3816 Uncharacterized protein conserved in bacteria.
 
     0.773
EAR50789.1
Hypothetical protein.
  
     0.769
EAR49702.1
COG2154 Pterin-4a-carbinolamine dehydratase.
   
    0.696
EAR50544.1
Hypothetical protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division.
  
     0.493
EAR50888.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
     0.490
nnrD
YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
     
 0.470
EAR51423.1
Hypothetical protein; COG3622 Hydroxypyruvate isomerase.
       0.460
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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