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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51475.1COG5267 Uncharacterized protein conserved in bacteria. (459 aa)    
Predicted Functional Partners:
EAR51476.1
COG4102 Uncharacterized protein conserved in bacteria.
     0.978
EAR51477.1
Hypothetical protein; COG1087 UDP-glucose 4-epimerase.
       0.628
EAR51478.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
       0.628
EAR51474.1
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
       0.539
EAR51472.1
COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
       0.427
EAR51473.1
Hypothetical protein.
       0.427
EAR49442.1
COG3524 Capsule polysaccharide export protein.
  
     0.414
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.